Rv2824c



Type
protein_coding
Name
Rv2824c
Locus Name

Rv2824c

Product

Hypothetical protein

Functional Category

Conserved hypotheticals

Location
3131770..3132714 (- strand)
Gene Length
944 bp
Nucleotides
TTGGCTGCTCGCCGAGGCGGCATCAGAAGGACGGATCTGCTACGTCGGAGTGGCCAGCCCCGAGGCCGACATCGCGCGAGTGCGGCGGAATCAGGCTTGACCTGGATTTCACCAACGCTTATTCTGGTGGGCTTTTCTCACCGAGGAGATCGCCGGATGACGGAACACTTGTCGCGATTGACGCTGACTCTAGAGGTTGATGCCCCGCTCGAACGCGCGAGGGTGGCGACCCTGGGGCCGCATCTTCATGGCGTCCTCATGGAGTCGATCCCGGCCGATTATGTGCAGACCCTCCACACCGTGCCGGTGAACCCGTACAGTCAGTACGCGCTGGCCCGCTCGACCACATCTTTGGAGTGGAAGATCAGCACGCTGACGAACGAGGCGCGGCAGCAGATCGTCGGACCTATCAACGACGCGGCGTTTGCGGGTTTTCGGCTCCGTGCGAGCGGGATAGCGACACAGGTCACGTCGCGATCGCTGGAGCAGAACCCGCTAAGTCAATTCGCGCGCATTTTCTACGCGCGGCCCGAGACGCGCAAGTTCCGGGTCGAGTTCCTGACGCCTACCGCATTCAAGCAATCCGGCGAGTACGTGTTCTGGCCGGATCCGCGGCTCGTGTTTCAGAGTCTCGCGCAGAAGTACGGTGCAATTGTCGACGGCGAAGAGCCCGATCCTGGCCTCATCGCCGAATTCGGTCAGTCGGTTCGCCTCTCCGCGTTCCGGGTGGCGTCGGCCCCGTTCGCGGTGGGCGCGGCGCGTGTTCCCGGCTTCACCGGCTCGGCCACGTTCACCGTCCGCGGTGTGGATACTTTTGCGAGCTATATCGCGGCGCTGTTGTGGTTCGGGGAGTTCTCGGGATGCGGAATAAAGGCATCCATGGGGATGGGCGCGATCCGGGTCCAGCCACTGGCACCGAGGGAAAAATGCGTACCGAAGCCATG
Drug Resistance

Check for drug resistance association at TBDREAMDB

Mutations

Check for mutants available at TARGET


Function
CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements (spacers) and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). The type III-A Csm effector complex binds crRNA and acts as a crRNA-guided RNase, DNase and cyclic oligoadenylate synthase; binding of target RNA cognate to the crRNA is required for all activities (Probable). This CRISPR-Cas system protects bacteria against transformation with plasmids containing DNA homologous to its spacer regions (PubMed:29979631). {ECO:0000269|PubMed:29979631, ECO:0000305|PubMed:29979631}.; FUNCTION: Processes pre-crRNA into individual crRNA units; accurate cleavage of pre-crRNA depends on a 3' stem-loop and the sequence of the bases in the stem. The mature crRNA is unusual for type III-A systems as it doe snot undergo 3' processing after Cas6 cleavage. Mature crRNA is about 71 nucleotides (nt long) with an 8 nt 5' handle and 28 nt repeat with a 10 nt stem-loop at the 3' end. {ECO:0000269|PubMed:29979631}.
Family

CRISPR-associated protein Cas6/Cse3/CasE family

GO
InterPro

UniProt
P9WPJ1
GenBank
Rv2824c
EnsemblBacteria
Rv2824c
Mycobrowser
Rv2824c


Summary
Name
CRISPR-associated endoribonuclease Cas6 (EC 3.1.-.-)
Family
CRISPR-associated protein Cas6/Cse3/CasE family
Protein Sequence
MAARRGGIRRTDLLRRSGQPRGRHRASAAESGLTWISPTLILVGFSHRGDRRMTEHLSRLTLTLEVDAPLERARVATLGPHLHGVLMESIPADYVQTLHTVPVNPYSQYALARSTTSLEWKISTLTNEARQQIVGPINDAAFAGFRLRASGIATQVTSRSLEQNPLSQFARIFYARPETRKFRVEFLTPTAFKQSGEYVFWPDPRLVFQSLAQKYGAIVDGEEPDPGLIAEFGQSVRLSAFRVASAPFAVGAARVPGFTGSATFTVRGVDTFASYIAALLWFGEFSGCGIKASMGMGAIRVQPLAPREKCVPKP
Mass
34,432 Da
Length
314 Aa

Rv2824c doesn't seem to be a targeted by any drug.


Rv2824c doesn't seem to be involved in any pathway.


Mycobacterium tuberculosis type III-A CRISPR/Cas system crRNA and its maturation have atypical features.
FASEB J. 2019 Jan;33(1):1496-1509. doi: 10.1096/fj.201800557RR. Epub 2018 Jul 6.
Proteogenomic analysis of Mycobacterium tuberculosis by high resolution mass spectrometry.
Mol Cell Proteomics. 2011 Dec;10(12):M111.011627. doi: 10.1074/mcp.M111.011445. Epub 2011 Oct 3.
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence.
Nature. 1998 Jun 11;393(6685):537-44. doi: 10.1038/31159.