serB2



Type
protein_coding
Name
serB2
Locus Name

Rv3042c

Product

Probable phosphoserine phosphatase SerB2 (PSP) (O-phosphoserine phosphohydrolase) (pspase)

Functional Category

Intermediary metabolism and respiration

Location
3401933..3403162 (- strand)
Gene Length
1229 bp
Nucleotides
ATGCCAGCCAAGGTGTCGGTGCTGATCACGGTCACCGGCATGGATCAGCCAGGCGTGACATCCGCGCTCTTCGAGGTGCTCGCGCAGCACGGAGTCGAGCTGCTCAACGTCGAACAAGTGGTGATCCGGGGCCGGCTCACGCTGGGTGTGCTGGTGTCGTGCCCGCTGGACGTTGCCGACGGTACCGCGCTGCGCGACGACGTCGCGGCCGCCATCCACGGGGTGGGTCTAGACGTCGCCATCGAGCGCAGCGACGATCTGCCAATCATTCGGCAACCGTCCACCCACACCATTTTCGTGCTGGGACGCCCGATTACCGCCGGAGCGTTCAGCGCGGTGGCCAGGGGAGTGGCCGCACTCGGCGTCAACATCGACTTCATCCGCGGCATTTCCGACTACCCGGTCACCGGCCTGGAGTTGCGGGTCTCGGTGCCGCCTGGATGCGTGGGTCCGCTGCAGATCGCCCTGACCAAGGTGGCCGCCGAAGAGCATGTCGATGTGGCCGTCGAGGACTACGGCTTGGCTTGGCGCACCAAACGCCTGATCGTCTTCGACGTCGACTCCACTCTGGTCCAAGGCGAGGTCATCGAGATGCTGGCAGCCCGTGCGGGTGCCCAGGGACAGGTCGCCGCGATCACCGAGGCCGCGATGCGTGGTGAGCTGGACTTCGCCGAGTCGCTGCAGCGTCGTGTTGCCACCTTGGCGGGGCTGCCCGCGACGGTGATAGACGACGTCGCCGAGCAGCTCGAACTGATGCCCGGTGCTCGGACCACGATCCGGACCTTGCGGCGTCTGGGTTTTCGCTGCGGTGTGGTTTCCGGCGGCTTTCGGCGGATCATCGAGCCGCTCGCACGCGAGTTGATGTTGGATTTCGTTGCGTCCAACGAGCTGGAAATCGTCGATGGCATTCTTACCGGCCGGGTCGTGGGGCCGATTGTTGACCGGCCCGGCAAGGCCAAGGCGCTTCGGGACTTCGCGAGCCAGTATGGGGTGCCGATGGAGCAGACCGTCGCGGTCGGCGACGGCGCCAACGATATCGACATGCTGGGCGCGGCCGGGCTGGGAATAGCATTCAACGCCAAGCCGGCGTTGCGTGAGGTCGCCGATGCGTCGTTGAGCCATCCGTACCTGGACACGGTGTTGTTCTTGTTGGGCGTGACTCGCGGTGAGATCGAGGCCGCCGACGCCGGCGACTGTGGGGTGCGTCGCGTCGAAATCCCGGCCGACTA
Drug Resistance

Check for drug resistance association at TBDREAMDB

Mutations

Check for mutants available at TARGET


Function
Catalyzes the dephosphorylation of O-phospho-L-serine into L-serine, a step in the L-serine biosynthetic pathway (PubMed:25037224, PubMed:25521849). Exhibits high specificity for L-phosphoserine compared to substrates like L-phosphothreonine (5% relative activity) and L-phosphotyrosine (1.7% relative activity) (PubMed:25521849). {ECO:0000269|PubMed:25037224, ECO:0000269|PubMed:25521849}.; FUNCTION: In the host, induces significant cytoskeleton rearrangements through cofilin dephosphorylation and its subsequent activation, and affects the expression of genes that regulate actin dynamics. It specifically interacts with HSP90, HSP70 and HSP27 that block apoptotic pathways but not with other HSPs. Also interacts with GAPDH. It actively dephosphorylates MAP kinase p38 and NF-kappa B p65 (specifically at Ser-536) that play crucial roles in inflammatory and immune responses. This in turn leads to down-regulation of Interleukin 8, a chemotactic and inflammatory cytokine. Thus might help the pathogen to evade the host's immune response (PubMed:26984196). Exogenous addition of purified SerB2 protein to human THP-1 cells (that can be differentiated into macrophage-like cells) induces microtubule rearrangements; the phosphatase activity is co-related to the elicited rearrangements, while addition of the ACT-domains alone elicits no rearrangements (PubMed:25521849). {ECO:0000269|PubMed:25521849, ECO:0000269|PubMed:26984196}.
Family

HAD-like hydrolase superfamily, SerB family

GO
InterPro

UniProt
O53289
GenBank
Rv3042c
EnsemblBacteria
Rv3042c
Mycobrowser
Rv3042c


Summary
Name
Phosphoserine phosphatase SerB2 (PSP) (PSPase) (EC 3.1.3.3) (O-phosphoserine phosphohydrolase) (Protein-serine/threonine phosphatase) (EC 3.1.3.16)
Family
HAD-like hydrolase superfamily, SerB family
Protein Sequence
MPAKVSVLITVTGMDQPGVTSALFEVLAQHGVELLNVEQVVIRGRLTLGVLVSCPLDVADGTALRDDVAAAIHGVGLDVAIERSDDLPIIRQPSTHTIFVLGRPITAGAFSAVARGVAALGVNIDFIRGISDYPVTGLELRVSVPPGCVGPLQIALTKVAAEEHVDVAVEDYGLAWRTKRLIVFDVDSTLVQGEVIEMLAARAGAQGQVAAITEAAMRGELDFAESLQRRVATLAGLPATVIDDVAEQLELMPGARTTIRTLRRLGFRCGVVSGGFRRIIEPLARELMLDFVASNELEIVDGILTGRVVGPIVDRPGKAKALRDFASQYGVPMEQTVAVGDGANDIDMLGAAGLGIAFNAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAADAGDCGVRRVEIPAD
Mass
43,059 Da
Length
409 Aa

Rv3042c doesn't seem to be a targeted by any drug.



The M. tuberculosis HAD phosphatase (Rv3042c) interacts with host proteins and is inhibited by Clofazimine.
Cell Mol Life Sci. 2016 Sep;73(17):3401-17. doi: 10.1007/s00018-016-2177-2. Epub 2016 Mar 17.
Characterization of M. tuberculosis SerB2, an essential HAD-family phosphatase, reveals novel properties.
PLoS One. 2014 Dec 18;9(12):e115409. doi: 10.1371/journal.pone.0115409. eCollection 2014.
High throughput screen identifies small molecule inhibitors specific for Mycobacterium tuberculosis phosphoserine phosphatase.
J Biol Chem. 2014 Sep 5;289(36):25149-65. doi: 10.1074/jbc.M114.597682. Epub 2014 Jul 18.
Proteogenomic analysis of Mycobacterium tuberculosis by high resolution mass spectrometry.
Mol Cell Proteomics. 2011 Dec;10(12):M111.011627. doi: 10.1074/mcp.M111.011445. Epub 2011 Oct 3.
Genes required for mycobacterial growth defined by high density mutagenesis.
Mol Microbiol. 2003 Apr;48(1):77-84.
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence.
Nature. 1998 Jun 11;393(6685):537-44. doi: 10.1038/31159.